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Table 1 Databases, tools, resources and software used in the present study

From: In silico molecular cytogenetics: a bioinformatic approach to prioritization of candidate genes and copy number variations for basic and clinical genome research

Database-tool-resource-software URL Acquired data or application
UCSC Genome Browser (Version: Feb. 2009 GRCh37/hg19) Mapping of molecular cytogenetic data
Ensembl Genome Browser
NCBI Build 37.1/NCBI Map Viewer
Database of Genomic Variants Data on natural genome variations
OMIM (online Mendelian inheritance in Man) Clinical data
DECIPHER (Database of Chromosomal Imbalance and Phenotype in Humans using Ensembl Resources)
Phenotype-Genotype Integrator (PheGenI)
AutDB (web-based searchable database for autism research)
BioGPS[17] Gene expression data
Cytoscape software (Version: 3.1.1)[60] Interactome analysis
Reactome[61] Pathway analysis
Pathway commons
KEGG (Kyoto Encyclopedia of Genes and Genomes)
NCBI BioSystems Database
NCBI gene Various gene information
PubMed Bibliographic searches and evaluations
Google scholar