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Table 2 Variants identified by whole exome sequencing in our subject

From: Identification of a novel isolated 4q35.2 microdeletion in a Chinese pediatric patient using chromosomal microarray analysis: a case report and literature review

Gene

RefGene

Variants

Mode of inheritance

Genotype

Asian frequency

ACMG guidelines

Original

PHKA2

NM_000292

c.1828A > G

p.T610A

XLR

hem

VOUS

Maternal

CDH2

NM_001792

c.1471G > C

p.V491L

AD

het

0.0002

VOUS

Maternal

CIC

NM_001386298

c.6058C > T

p.P2020S

AD

het

0.0002

VOUS

Paternal

KAT6A

NM_006766

c.4825A > G

p.M1609V

AD

het

0.0003

VOUS

Paternal

NALCN

NM_052867

c.1587C > G

p.C529W

AR,AD

het

0.0001

VOUS

Maternal

CTC1

NM_025099

c.2386-1G > A

AR

het

0.0007

LP

Maternal

MANBA

NM_005908

c.280C > A

p.Q94K

AR

het

0.0011

VOUS

Maternal

  1. XLR X-linked recessive; AD Autosomal dominant; AR Autosomal recessive; VOUS Variants of unknown significance; LP Likely pathogenic; hem Hemizygote; het Heterozygote