Skip to main content

Table 1 Details of the homozygous loci on chromosome 2 of fetus 1

From: Prenatal diagnosis of paternal uniparental disomy for chromosome 2 in two fetuses with intrauterine growth restriction

Gene

Location

Variant

Zygosity

Pathogenicity prediction

GnomAD (MAF %)

Fetus

Father

Mother

SIFT

Poly-Phen

Clin-Pred

Mutation Taster

TTN

chr2:179,577,553

c.27199G > A(p.Val9067Met)

Hom

Het

Wild

Tol

Beni

Tol

Poly

SA: 0.009808

          

Lat: 0.002892

IFT172

chr2:27,683,894

c.2509G > A(p.Ala837Thr)

Hom

Het

Wild

Del

Prob dam

Del

Dis Caus

EA: 0.005437

          

SA: 0.003266

  1. Hom Homozygous, Het Heterozygous, Wild: Wild-type, Del deleterious, Tol tolerated, Prob dam probably damaging, Poss dam possibly damaging, beni benign, Dis Caus disease causing, Poly polymorphism, Neu neutral
  2. Higher GERP scores are more deleterious
  3. The gnomAD MAF: NFE non-Finnish European, Lat Latin, Afr African, EA East Asian; Fin Finish, SA South Asian