Table 1 Summary of copy number variants (CNVs) of the 20 analysed AQSW pigs
From: Genome-wide detection of CNV regions between Anqing six-end-white and Duroc pigs
Sample | Number of deletion | Number of duplication | Number of CNVs | Length_avg (bp) | Length_min (bp) | Length_max (bp) |
|---|---|---|---|---|---|---|
LB1 | 660 | 582 | 1242 | 122,468 | 1100 | 16,700,000 |
LB2 | 658 | 669 | 1327 | 113,532 | 1100 | 18,300,000 |
LB3 | 538 | 605 | 1143 | 156,402 | 1100 | 121,000,000 |
LB4 | 567 | 657 | 1224 | 122,625 | 1100 | 14,100,000 |
LB5 | 591 | 585 | 1176 | 130,464 | 1100 | 18,200,000 |
LB6 | 555 | 665 | 1220 | 123,020 | 1100 | 30,800,000 |
LB7 | 640 | 611 | 1251 | 118,972 | 1100 | 20,500,000 |
LB8 | 572 | 524 | 1096 | 148,484 | 1200 | 63,600,000 |
LB9 | 650 | 610 | 1260 | 117,312 | 1100 | 13,100,000 |
LB10 | 621 | 706 | 1327 | 112,651 | 1100 | 13,300,000 |
LB11 | 681 | 671 | 1352 | 71,830 | 1100 | 14,500,000 |
LB12 | 739 | 615 | 1354 | 46,305 | 1100 | 14,400,000 |
LB13 | 776 | 570 | 1346 | 45,779 | 1100 | 14,500,000 |
LB14 | 731 | 512 | 1243 | 50,190 | 1100 | 14,500,000 |
LB15 | 752 | 586 | 1338 | 47,927 | 1000 | 14,500,000 |
LB16 | 800 | 571 | 1371 | 44,872 | 1000 | 15,600,000 |
LB17 | 784 | 580 | 1364 | 46,865 | 1000 | 14,500,000 |
LB18 | 688 | 601 | 1289 | 51,236 | 1100 | 14,500,000 |
LB19 | 610 | 586 | 1196 | 51,563 | 1100 | 14,500,000 |
LB20 | 800 | 544 | 1344 | 43,571 | 1000 | 14,500,000 |