Table 3 qPCR validation of CNV found with GWAS SNP Array 6.0 in Mexican-Mestizo
From: Frequent copy number variants in a cohort of Mexican-Mestizo individuals
ID | 2p11.2 chr2: 89,143,755–92,057,597 | 8p11.22 chr8: 39,230,170–39,386,952 | 14q32.33 chr14: 106,078,230–107,100,266 | 15q11.2 chr15: 21,914,540–22,681,064 | ||||
|---|---|---|---|---|---|---|---|---|
Healthy | CN Array | CN qPCR | CN Array | CN qPCR | CN Array | CN qPCR | CN Array | CN qPCR |
CtrNV03 | 3 | 2 | 1 | 1 | 3 | 2 | 2 | 2 |
CtrNV04 | 4 | 7 | 2 | 1 | 4 | 3 | 4 | 1 |
CtrNV05 | 3 | 4 | 2 | 1 | 3 | 2 | 2 | 2 |
CtrNV07 | 4 | 5 | 1 | 1 | 3 | 3 | 2 | 4 |
CtrNV08 | 4 | 6 | 1 | 1 | 4 | 3 | 1 | 2 |
CtrNV10 | 4 | 6 | 2 | 1 | 4 | 2 | 1 | 5 |
CtrNV11 | 4 | 4 | 1 | 1 | 3 | 3 | 3 | 4 |
CtrNV13 | 3 | 17 | 1 | 1 | 3 | 4 | 1 | 1 |
CtrNV16 | 4 | 5 | 2 | 1 | 4 | 3 | 1 | 1 |
Aneuploid | ||||||||
NV20T13 | 4 | 7 | 1 | 1 | 4 | 2 | 3 | 4 |
NV31X0 | 4 | 4 | 1 | 1 | 3 | 3 | 2 | ND |
NV32T21 | 3 | 10 | 2 | ND | 3 | 3 | 1 | ND |
NV53T18 | 3 | 11 | 2 | 1 | 3 | 5 | 3 | 2 |
NV56T13 | 4 | 4 | 2 | ND | 3 | ND | 3 | ND |
NV60X0 | 4 | 10 | 2 | 2 | 3 | 5 | 1 | 1 |
NV62T18 | 4 | 7 | 1 | 1 | 4 | ND | 2 | ND |
NV115X0 | 4 | ND | 2 | 2 | 3 | 4 | 3 | 3 |
AE19T18 | 3 | ND | 2 | ND | 4 | ND | 1 | 1 |