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Table 1 Results of high-resolution SNP Microarray

From: Bi-allelic amplification of ATM gene in blastoid variant of mantle cell lymphoma: a novel mechanism of inactivation due to chromoanagenesis?

Chr CNV Cytoband start Cytoband end Genomic position start–end GRCh37 Size (Mb) CN state
3 Gain q13.11 q29 104,275,677–197,851,986 93.6 3
3 GainMosaic q13.11 q29 104,347,395–197,851,986 93.5 3
4 LossMosaic q13.1 q13.2 62,098,409–68,284,650 6.2 2
7 Gain p22.3 p22.1 43,360–6,055,929 6.0 4
7 Gain q21.13 q22.1 9,1027,069–100,918,485 9.9 3
7 Loss p22.1 p21.3 7,263,512–12,522,467 5.3 1
7 Loss p21.3 p14.1 13,107,394–37,647,617 24.5 1
7 Loss q31.2 q36.3 116,762,426–159,119,707 42.4 1
7 GainMosaic p14.2 p14.1 36,647,816–40,257,749 3.6 3
7 GainMosaic q21.11 q22.1 85,370,550–103,219,749 17.9 3
7 LossMosaic p21.3 p14.3 9,301,862–33,690,301 24.4 1
7 LossMosaic q31.31 q36.3 117,402,248–159,119,707 41.7 1
9 Loss p24.2 p13.2 2,582,103–38,044,560 35.5 1
9 LossMosaic p24.2 p13.2 2,765,255–38,317,590 35.6 1
11 Gain p15.5 p12 1,806,954–36,471,669 34.7 3
11 Gain q13.4 q21 74,900,610–9,6287,065 21.4 3
11 Gain q21 q22.2 96,439,368–102,413,943 6.0 3
11 Gain q22.2 q22.3 102,414,120–108,729,175 6.3 4
11 Gain q22.3 q23.1 109,718,291–111,689,133 2.0 4
11 Loss q22.3 q22.3 108,729,392–109,715,602 9.9 1
11 Loss q23.1 q25 111,731,307–134,788,683 23.1 1
11 GainMosaic p15.5 p12 230,615–36,614,253 36.4 3
11 LossMosaic q23.3 q25 114,847,579–134,938,470 20.1 1
13 Loss q32.1 q34 95,258,943–114,609,241 19.4 1
13 LossMosaic q12.3 q21.2 31,921,726–62,123,665 30.2 2
13 LossMosaic q32.1 q34 96,138,381–115,107,733 19.0 1
14 Gain q32.33 q32.33 106,072,250–106,692,891 0.6 3
17 Loss p13.3 p11.2 525–21,565,553 21.6 1
17 LossMosaic p13.3 p11.2 525–20,007,075 20.0 1
19 Gain q13.12 q13.43 37,805,520–58,813,857 21.0 3
19 GainMosaic q13.12 q13.43 37,516,085–58,956,888 21.4 3
X Loss p22.33 p21.3 2,693,466–25,047,578 22.4 1
X Loss p21.3 q23 25,048,192–115,589,080 90.5 1
X Loss q23 q24 115,592,089–118,552,562 3.0 1
X Loss q24 q28 118,552,991–155,059,506 36.5 1
Y Gain p11.31 q11.23 2,660,575–28,799,937 26.1 1