Table 2 DNA sequences flanking the 18 breakpoints in our patient
Breakpoints at Chromosome 1 | Repeat Family | Repeat Class | Genes | |
|---|---|---|---|---|
1 | 192,827,141 | L1 | LINE | |
2 | 195,857,632 | L1 | LINE | |
3 | 172,866,584 | L2 | LINE | |
4 | 172,866,607 | L2 | LINE | |
5 | 192,473,950 | L2 | LINE | |
6 | 192,831,551 | CR1 | LINE | |
1 | 225,475,803 | Alu | SINE | |
2 | 225,476,068 | Alu | SINE | |
3 | 229,387,971 | Alu | SINE | |
4 | 166,154,922 | MIR | SINE | FAM78B |
5 | 186,739,165 | MIR | SINE | |
1 | 175,081,899 | ERV1 | LTR | TNN |
2 | 229,372,123 | ERV1 | LTR | |
3 | 182,416,826 | ERVL | LTR | |
4 | 195,906,366 | ERVL | LTR | |
1 | 195,717,189 | Simple repeat | Simple repeat | |
2 | 195,784,837 | Simple repeat | Simple repeat | |
1 | 192,827,064 | No known repeat | No known repeat |