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Table 1 Complex rearrangement breakpoint junctions as delineated by whole-genome mate-pair sequencing (WG-MPS) and Sanger sequencing (SS)

From: Cryptic breakpoint identified by whole-genome mate-pair sequencing in a rare paternally inherited complex chromosomal rearrangement

Chromosomal break Translocation junctions as predicted by WG-MPS (GRCh37/hg19) Translocation breakpoint positions as defined by SS (GRCh37/hg19)
chr6 (1st break) chr6:100899302-100900111 [TRANSLOC_BAL_18reads_chr10:129761169-129761668] chr6:100899825-100899830
chr6 (2nd break) chr6:102274568-102275034 [TRANSLOC_BAL_13reads_chr7:147888949-147890271] chr6:102274901-102274908
chr7 chr7:147888949-147890271 [TRANSLOC_BAL_13reads_chr6:102274568-102275034] chr7:147889469-147889474
chr10 chr10:129761169-129761668 [TRANSLOC_BAL_18reads_chr6:100899302-100900111] chr10:129761568-129761576