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Table 1 Probes and libraries used for FISH

From: Bone marrow failure may be caused by chromosome anomalies exerting effects on RUNX1T1 gene

Pt

Chromosome

Probes/libraries

Band localization

Genomic Localization (bp) (hg19)

1

8

AML1/ETOa

WCP 1b

designed for t(8;21)

Whole chromosome paint library

2

2

WCP 2b

CTD-2314L14c

CTD-2599D22c

ALKd

CTD-3028D11 c

CTD-2232H14c

CTD-2566H13c

CTD-2532N8c

CTD-2371H10c

CTD-2382F21c

CTD-2052G24c

CTD-3058K15c

Whole chromosome paint library

2p23.3

2p23.2

2p23.2–23.1

2p23.1

2p22.2

2p22.2–22.1

2p21.3

2p21.1

2p16.3

2p15

2p15–14

27,436,476–27,577,216 bp

29,678,603–29,819,833 bp

-

31,532,615–31,667,611 bp

36,717,490–36,828,693 bp

38,563,970–38,725,504 bp

42,157,290–42,301,116 bp

46,582,036–46,715,607 bp

48,326,711–48,434,143 bp

61,463,234–61,600,608 bp

64,034,477–64,232,972 bp

8

WCP 8b

AML1/ETOa

CTD-2341G19c

CTD-2246G22c

CTD-3245G9c

CTD-2330N9c

Whole chromosome paint library designed for t(8;21)

8q21.13

8q21.3

8q21.3

8q21.3

-

83,886,651–83,982,215 bp

87,885,140–87,980,460 bp

91,740,722–91,959,017 bp

92,778,106–92,922,619 bp

  1. aAML1/ETO translocation, dual fusion probe, Cytocell Technologies, Cambridge, UK
  2. bWCP, Cytocell Technologies, Cambridge, UK
  3. cBAC probes, Thermo Fisher Scientific, Waltham, MA, USA
  4. dZytoLight SPEC ALK Dual Color Break Apart probe, Zytovision GmbH, Bremerhaven, Germany