Table 2 Selected LTR-RTs from CENSOR results
Name | From | To | Name | From | To | Class | Name |
|---|---|---|---|---|---|---|---|
scaffold1|size42338 | 4200 | 5326 | Gypsy-48_GR-I | 1376 | 2498 | LTR/Gypsy | sca1 (4200-5326) |
scaffold1|size42338 | 13782 | 17200 | Copia-80_ST-I | 194 | 3604 | LTR/Copia | sca1 (13782-17200) |
scaffold1|size42338 | 31153 | 32254 | Gypsy-48_GR-I | 3205 | 4308 | LTR/Gypsy | sca1 (31153-32254) |
scaffold2|size26803 | 7498 | 8637 | Gypsy-48_GR-I | 76 | 1221 | LTR/Gypsy | sca2 (7498-8637) |
scaffold2|size26803 | 23904 | 25399 | Gypsy-18_GR-I | 1326 | 2899 | LTR/Gypsy | sca2 (23904-25399) |
scaffold3|size22097 | 10623 | 11420 | Gypsy-18_GR-I | 2893 | 3697 | LTR/Gypsy | sca3 (10623-11420) |
scaffold3|size22097 | 17834 | 19556 | Gypsy-48_GR-I | 2773 | 4562 | LTR/Gypsy | sca3 (17834-19556) |
scaffold3|size22097 | 20731 | 21832 | Gypsy-48_GR-I | 3260 | 4363 | LTR/Gypsy | sca3 (20731-21832) |
scaffold2|size26803 | 13047 | 13565 | Copia-2_JC-I | 4861 | 5382 | LTR/Copia | sca2 (13047-13565) |
scaffold2|size26803 | 19133 | 19572 | Gypsy-1_JC-I | 276 | 715 | LTR/Gypsy | sca2 (19133-19572) |
scaffold2|size26803 | 18785 | 21330 | Gypsy-48_GR-I | 50 | 2596 | LTR/Gypsy | sca2 (18785-21330) |
scaffold3|size22907 | 5533 | 6040 | Gypsy-1_JC-I | 269 | 774 | LTR/Gypsy | sca3 (5533-6040) |