Table 1 Summary of identified repeats in BAC sequence by CENSOR
Repeat class | Fragments | Length (bp) | Percentage accounting for BAC sequence |
|---|---|---|---|
Integrated Virus | 1 | 86 | 0.09Â % |
DNA transposon | 25 | 6086 | 6.67Â % |
LTR Retrotransposon | 94 | 50373 | 55.21Â % |
BEL | 1 | 65 | 0.07Â % |
Copia | 4 | 4251 | 4.66Â % |
Gypsy | 89 | 46057 | 50.48Â % |
Non-LTR Retrotransposon | 9 | 627 | 0.69Â % |
Total | 129 | 57172 | 62.66Â % |