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Table 2 The 68 ECBs detected in this study in HPI given as cytoband and genomic data (GRCh37/hg19) as well as FISH-probes used and comparison to HLA

From: Application of multicolor banding combined with heterochromatic and locus-specific probes identify evolutionary conserved breakpoints in Hylobates pileatus

Breakpoint (cytoband)

Narrowed down by

Localization acc. to GRCh37/hg19

Same ECB in HLA [8]

1p35.2

RP4-669K10 / RP11-114B7

28,853,741–33,101,404

+

1p33

RP11-330M19 / RP4-631H13

48,285,909–53,304,823

+

1p31.1

RP4-759M20 / RP5-944F13

67,033,180–70,103,142

+

1q23.1

RP11-307C12 / RP11-343F16

154,965,587–164,006,044

+

1q25.2

RP5-990P15 / RP11-181K3

178,490,946–183,063,114

+

1q32.2

RP11-110E24 / RP11-434B7

210,211,975–213,224,588

+

2p22.3

RP11-23B13 / RP11-119B15

30,979,722–35,864,069

+

2p11.2

RP11-316G9 / RP11-708D7

90,202,000–95,617,775

+

2p11.1 ~ q11.1

n.a.

90,500,000–96,800,000

-

2q14.2

Proximal to RP11-69O6

~110,000,000–121,987,648

+

2q22.3

RP11-107E5 / RP11-21M18

145,324,328–151,156,597

+

3p26.3

Proximal to subtel3pter

~2,000,000–~ 5,000,000

+

3p14.3

RP11-904G16 / RP11-229A12

54,646,599–57,395,394

-

3p12.3

RP11-552N9 / RP11-16M12

72,550,809–78,313,071

+

3q22.1

RP11-221E20 / RP11-517B11

128,695,100–131,245,291

 

3q24

RP11-88H10 7 RP11-500K7

145,702,132–147,840,000

 

4p11 ~ q11

n.a.

48,200,000–52,700,000

+

4q13.1

RP11-498E11 / RP11-92H22

66,083,151–71,660,470

-

4q26

MCB

126,000,000–137,000,000

+

5p11 ~ q11.1

n.a.

46,100,000–50,700,000

+

5q14.1

CTD-2200O3 / RP11-356D23

76,503,000–81,368,874

+

5q31.1

RP11-729C24 / CTD-2562E1

131,949,164–134,147,482

+

6p21.2

RP3-431A14

36,643,279–36,838,641

+

6p11.1 ~ q11

n.a.

58,700,000–63,300,000

+

6q15

RP11-223J24 / RP1-122O8

86,460,000–90,317,182

+

7p22.3

Distal to subtel7pter

0–~ 2,500,000

+

7q21.11

RP11-235F21 / RP11-448A3

76,680,916–81,315,990

+

8p22

RP11-19N21 / RP11-459H21

16,574,193–21,137,316

+

8p11.1 ~ q11.1

n.a.

43,100,000–48,100,000

+

8q21.11

RP11-347D13 / RP11-48D4

70,768,835–77,707,273

+

9p24.3

Proximal to subtel9pter

0–~ 2,000,000

+

9p12

Proximal to RP11-128P23

35,360,000–~ 50,000,000

+

9q21.12

Distal to RP11-373A9

72,849,245–~ 90,000,000

+

10p12.1

RP11-478H13 / RP11-379L21

23,279,768–29,095,050

+

11p15.5

Distal to subtel11pter

0–~ 1,200,000

+

11p11.2

Distal to RP11-397M16

48,150,000–~ 50,000,000

+

11p11.11-q11

n.a.

51,600,000–55,700,000

-

11q13.1

Distal to RP11-399J13

64,808,042–~ 70,000,000

+

12p11.21

RP11-517B23

31,471,644–32,029,051

-

12q13.1

Proximal to RP11-112N23

~45,000,000–50,731,377

+

12q13.3

RP11-112N23 / RP11-629N8

50,912,474–65,153,301

+

12q22

RP11-24I19 / RP11-406H4

94,634,754–99,487,137

+

13p13

n.a.

0–~ 200,000

-

13q21.32

RP11-100C24 / RP11-187E23

57,831,960–67,194,978

-

13q33.2

RP11-564N10 / RP11-141M24

102,655,660–109,369,625

+

14p13

n.a.

0–~ 200,000

-

14q21.2

RP11-35B20 / RP11-262M8

45,887,918–52,697,235

+

15p13

n.a.

0–~ 200,000

-

15q22.1

RP11-215J7 / RP11-219B17

55,027,961–60,973,768

+

15q26.3

Distal to subtel15qter

~102,200,000–102,531,392

+

16p12.2

RP11-705C1

24,089,175–24,270,169

-

16q22.2

RP5-991G20 / RP11-24I3

72,825,522–77,786,210

+

17p13.3

Proximal to subtel17pter

0–~ 500,000

+

17p11.2

Distal from RP11-746M1

~15,000,000–21,160,776-28

+

17q11.2

Distal from RP11-403E9

28,495,981–~ 40,000,000

-

17q21.1

RP11-47L3 / RP11-58O9

33,661,870–38,501,211

+

17q22

RP5-843B9 / RP11-429O1

46,228,000–50,467,875

+

17q23.2

RP11-142B17 / RP11-74H8

56,840,764–64,676,149

+

18p11.32

Proximal to subtel18pter

0–~ 200,000

+

18p11.1 ~ q11.1

n.a.

15,400,000–19,000,000

-

19p13.2

RP11-565J3 / RP11-79F15

6,979,038–8,853,332

+

19q13.12

RP11-430N3 / RP11-649P22

36,673,365–38,450,859

+

19q13.31

RP11-537N4 / RP11-21J15

40,997,000–45,034,762

+

19q13.32

RP11-21J15 / RP11-1089K2

45,208,382–47,311,583

+

19q13.42

RP11-10I11 / RP11-44L20

51,622,674–53,472,377

+

21p11.1 ~ q11.1

n.a.

10,900,000–14,300,000

+

22p13

n.a.

0–~ 200,000

-

22q13.33

Distal to subtel22qter

~51,000,000–51,304,566

+