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Table 1 Summary of genomic imbalances detected by aCGH in this case

From: Molecular cytogenetic characterization of undifferentiated embryonal sarcoma of the liver: a case report and literature review

Chromosome region Genomic coordinates (NCBI Build 36.3) (bp) Size (Mb) Number of genes (Interesting genes)
   Loss Gain  
1pter-p36.33 712558-2243993   1.53 73 (NOC2L, TNFRSF18, TNFRSF4)
1p13.1 116168951-117581500 1.4   21 (CD9P1, TRIM45)
2pter-p25.3 6477-3368813   3.4 19 (TSSC1)
2q11.2-q13 100018907-112693871 12.7   129
2q14.1 114650166-115262744 0.6   1 (intron of DPP10)
2q14.1 115268926-115418974   0.15 1 (intron of DPP10)
2q14.1-q21.3 115425158-136187596 20.8   166
2q22.1-q23.3 137775162-153625228 15.9   61
2q23.3-q24.1 153631373-159375017 5.7   27
2q24.1-q24.3 159381356-165156442 5.8   42
2q24.3 165162652-165968804 0.78   6
2q24.3 167625090-169268884 1.6   9 (STK39)
3pter-p12.1 37570-85662543 85.6   718
4pter-p15.2 191-26362651   26.4 255 (FGFR3)
4p13 42031490-43193968   1.2 4
4p13-p11 43200181-49200003   6.0 37
4p11-qter 49275218-191262539 142   931
4q31.1 141506279-141625040   0.12 2 (SCOC, CLGN)
5pter-p15.31 68753-6212561   6.2 49 (AHRR, TRIP13, TERT, NDUFS6, ADAMTS16)
5q21.2 102968812-104225203 1.3   0
5q21.3 105381409-105843899 0.47   0
5q21.3-q22.1 107493790-110062750 2.6   11
5q23.1 118512522-121281380 2.8   12
5q23.2-q23.3 124356361-129125131 4.8   26
5q31.1-q31.2 133375174-136043822 2.7   36 (TCF7)
5q31.2 136231375-136300191 0.07   0
5q31.2-q32 136925251-144481375 7.6   158 (WNT8A, EGR1)
5q32-q33.1 145268956-148600233 3.3   31
5q33.2-q33.3 155168994-156318797 1.5   3 (SGCD)
5q34 166500163-166900243   0.4 1 (ODZ2)
5q35.2-qter 176325212-180650172   4.3 129 (FGFR4, SCGB3A1, FLT4)
6q22.33 129843975-130381431   0.54 4
8q24.12-qter 121625189-146262725 24.62   210 (HAS2, MYC)
9p24.1 8412749-8731371 0.318   2 (PTPRD)
9q34.11 129650050-130125185 0.475   20 (NAIF1, CIZ1)
9q34.3 140012561-140225027 0.213   3 (CACNA1B)
10pter-q22.1 87523-71568878 71.6   585
11pter-p15.4 187565-7193965 7.0   298
14q12-qter 25075026-106356252 81.3   1049 (IGH)
15q11.2-qter 20262522-100281493 80   1084
16pter-p13.3 53-5456277 5.5   267
17pter-p12 18890-15187519 15.2   334 (TP53)
19p13.3-p13.11 2250072-19137619 19.1   586
19p13.11 19143788-19306349   0.16 9
20q11.1-q13.32 28125216-56612507   28.5 408
20q13.32-qter 57343940-62387649 5.0   110
21q22.13-q22.3 38293990-45156291   6.9 120
22q12.3 31618959-34862722 3.3   23
22q13.1 36256330-37868873   1.6 55
22q13.1-qter 37975088-49581355 11.6   207